- Services
- ABL1 Kinase Domain Mutation Analysis
- Chimerism Assessment by Polymorphic Microsatellite Markers
- Detection of BCR ABL Major Fusion Transcripts
- Detection of BCR ABL Minor Fusion Transcripts
- EndLeukemia RNA Translocation Assay Analysis
- FIP1L1-PDGFRA Fusion Transcript Detection
- FLT3 Mutational Analysis
- hMLH1 Methylation Status
- Immunoglobulin Heavy Chain Gene Rearrangement
- Inv(16)(p13.1q22);CBFB-MYH11 Fusion Transcript Detection
- JAK2 p.V617F Mutational Analysis
- EndLeukemia Assay
- MD EndLymphoma Mutation Analysis
- MD FLT3-ITD Follow up Mutation MRD Analysis
- MD Focused Pharamacogenomics Genotyping Assay
- MD HPV Liquid Biopsy
- MD NPM1 MRD Mutation Analysis
- MDA Mutation Analysis Precision Panel Liquid Biopsy
- MGMT Methylation Status
- Microsatellite Instability Analysis (Tumors)
- PML-RARA/t(15;17) Fusion Transcript Detection
- RUNX1-RUNX1T1/t(8;21)(q22;q22) Fusion Transcript Detection
- Somatic Hypermutation Analysis, IGH
- T cell Receptor Beta Gene Rearrangement
- T cell Receptor Gamma Gene Rearrangement
- TGFB1 Polymorphism Real-Time PCR Genotyping
EndLeukemia Assay (NGS)
Indication
The EndLeukemia mutation screening assay is a next-generation sequencing (NGS) based test designed to screen for somatic mutations in exonic regions of 81 genes with therapeutic and/or prognostic importance in hematological malignancies. Detailed profiling of the mutations existing in the tumor is warranted to understand the genetic basis of cancer and improve overall patient diagnosis and treatment.
Methodology
Genomic DNA from peripheral blood or bone marrow is fragmented using restriction enzymes, followed by oligonucleotide probe hybridization, creating circularized DNA molecules containing the target regions. The DNA molecules are ligated, captured, and amplified by PCR, with sequencing performed on Illumina’s NextSeq instrument.
Test Parameters
Clinical specimens were reviewed for the markers listed:
| ANKRD26 | GFI1 | PTEN |
| ASXL1 | GNAS | PTPN11 |
| ASXL2 | HNRNPK | RAD21 |
| BCOR | HRAS | RARA |
| BCORL1 | IDH1 | RUNX1 |
| BRAF | IDH2 | SETBP1 |
| CALR | IKZF1 | SF1 |
| CBL | IL2RG | SF3A1 |
| CBLB | IL7R | SF3B1 |
| CBLC | JAK1 | SH2B3 |
| CEBPA | JAK2 | SMC1A |
| CREBBP | JAK3 | SMC3 |
| CRLF2 | KDM6A | SRSF2 |
| CSF3R | KIT | STAG1 |
| CUX1 | KRAS | STAG2 |
| DDX41 | MAP2K1 | STAT3 |
| DNMT3A | MLL | STAT5A |
| EED | MPL | STAT5B |
| ELANE | NF1 | SUZ12 |
| ETNK1 | NOTCH1 | TERC |
| ETV6 | NPM1 | TERT |
| EZH2 | NRAS | TET2 |
| FAM5C | PAX5 | TP53 |
| FBXW7 | PHF6 | U2AF1 |
| FLT3 | PIGA | U2AF2 |
| GATA1 | PML | WT1 |
| GATA2 | PRPF40B | ZRSR2 |
Turnaround Time
Seven days for routine and STAT
Sample Requirements
10 ml peripheral blood (PB) in purple-top (lavender top) tube (EDTA Vacutainer), sent on wet ice
or
2–5 ml of bone marrow aspirate (BM), sent on wet ice
CPT Codes
81455
The CPT codes provided are based on AMA guidelines and are for informational purposes only. CPT coding is the sole responsibility of the billing party. Please direct any questions regarding coding to the payer being billed.
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Research Areas
Find out about the four types of research taking place at UT MD Anderson.