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Publications
| K. Ahmed, D. Fuentes, J.S. Lin, R. Ali, A. Kaseb, W. Wei, J.D. Hazle, A. Qayyum, and K. Elsayes. Volumetric RECIST Assessment of Hepatocellular Carcinoma Response to Sorafenib via Random Forest based Automated Segmentation. Radiology, 2015. Submitted. [ bib ] |
| T. Figueira, D. Fuentes, M. Gagea, J. Ensor, K. Dixon, A. McWatters, S. Gupta, and A. Tam. Irreversible Electroporation (IRE) in the Epidural Space of the Porcine Spine: Effects on Dose Limiting Organs. Radiology, 2015. in review. [ bib ] |
| J Tinsley Oden, Ernesto ABF Lima, Regina C Almeida, Yusheng Feng, Marissa Nichole Rylander, D. Fuentes, Danial Faghihi, Mohammad M Rahman, Matthew DeWitt, and Manasa Gadde. Toward predictive multiscale modeling of vascular tumor growth. Archives of Computational Methods in Engineering, pages 1-45, 2015. [ bib ] |
| James A Bankson, Christopher M Walker, Marc S Ramirez, Wolfgang Stefan, D. Fuentes, Matthew E Merritt, Jaehyuk Lee, Vlad C Sandulache, Yunyun Chen, Liem Phan, et al. Kinetic modeling and constrained reconstruction of hyperpolarized 1-13c-pyruvate offers improved metabolic imaging of tumors. Cancer research, pages canres-0171, 2015. [ bib ] |
| F. Maier, C. J. MacLellan, D. Fuentes, E.N.K Cressman, K. Hwang, J. D. Hazle, and R. J. Stafford. A Multi-Parametric Pulse Sequence for Characterion of Thermochemical Ablation Injections. International Journal of Hyperthermia, 2015. in review. [ bib ] |
| R. Madankan, W. Stefan, J. D. Hazle, R. J. Stafford, and D. Fuentes. Accelerated Model-based Signal Reconstruction for Magnetic Resonance Imaging in Presence of Uncertainties. PMB, 2015. in review. [ bib ] |
| S. Fahrenholtz, T. Moon, M. Franco, D. Medina, J. D. Hazle, R. J. Stafford, F. Maier, S. Danish, A. Gowda, A. Shetty, T. Warburton, andD. Fuentes. A Model Evaluation Study for Treatment Planning of Laser Induced Thermal Therapy. International Journal of Hyperthermia, 31(7):705-714, 2015. [ bib ] |
| J. Yung, D. Fuentes, C. J. MacLellan, F. Maier, J. D. Hazle, and R. J. Stafford. Referenceless Magnetic Resonance Temperature Imaging using Gaussian Process Modeling. Medical Physics, 2015. in review. [ bib ] |
| W. Stefan, D. Fuentes, E. Yeniaras, K. Hwang, J. D. Hazle, and R. J. Stafford. Novel Method for Background Phase Removal on MRI Proton Resonance Frequency Measurements. Trans. Medical Imaging, 2015. in review. [ bib ] |
| F. Maier, D. Fuentes, J. S. Weinberg, J. Hazle, and R. J. Stafford. Robust Phase Unwrapping using a Sorted List, Multi-clustering Algorithm.Magnetic Resonance in Medicine, 73(4):1662-1668, 2015. [ bib | DOI | http ] |
| D. Fuentes, J. Contreras, J. Yu, R. He, E. Castillo, R. Castillo, and T. Guerrero. Morphometry-based measurements of the structural response to whole-brain radiation. International Journal of Computer Assisted Radiology and Surgery, 10:393-401, 2014. [ bib | DOI | http ] |
| Edward Castillo, Richard Castillo, D. Fuentes, and Thomas Guerrero. Computing global minimi to a constrained b-spline image registration problem from optimal l1 perturbations to block match data. Medical physics, 41(4):041904, 2014. [ bib ] |
| Christopher J MacLellan, D. Fuentes, Andrew M Elliott, Jon Schwartz, John D Hazle, and R Jason Stafford. Estimating nanoparticle optical absorption with magnetic resonance temperature imaging and bioheat transfer simulation. International Journal of Hyperthermia, 30(1):47-55, 2013. [ bib ] |
| D. Fuentes, JT Oden, KR Diller, J Yung, Y Feng, JD Hazle, A Shetty, and RJ Stafford. Dynamic Data Driven Application Systems, chapter Computational and MR-guided Patient-Specific Laser Induced Thermal Therapy of Cancer. Springer , 2013. accepted. [ bib ] |
| E. Yeniaras, D. Fuentes, S.J. Fahrenholtz, J.S. Weinberg, F. Maier, J.D. Hazle, and R.J. Stafford. Design and initial evaluation of a treatment planning software system for MRI-guided laser ablation in the brain. International Journal of Computer Assisted Radiology and Surgery, pages 1-9, 2013. [ bib | DOI | http ] |
| S. Fahrenholtz, R. J. Stafford, J. Hazle, and D. Fuentes. Generalised polynomial chaos-based uncertainty quantification for planning MRgLITT procedures. International Journal of Hyperthermia, 29(4):324-335, 2013. PMC3924420. [ bib | http ] |
| R. Castillo, E. Castillo, D. Fuentes, M. Ahmad, A. M Wood, M. S. Ludwig, and T. Guerrero. A Reference Dataset for Deformable Image Registration Spatial Accuracy Evaluation using the COPDgene Study Archive. Physics in Medicine and Biology, 58(9):2861, 2013. PMC3677192. [ bib ] |
| D. Fuentes, A. Elliott, J. S. Weinberg, A. Shetty, J. D. Hazle, and R. J. Stafford. An Inverse Problem Approach to Recovery of In-Vivo Nanoparticle Concentrations from Thermal Image Monitoring of MR-Guided Laser Induced Thermal Therapy. Ann. BME., 41(1):100-111, 2013. PMC3524364. [ bib | http ] |
| D. Fuentes, J. Yung, J. D. Hazle, J. S. Weinberg, and R. J. Stafford. Kalman Filtered MR Temperature Imaging for Laser Induced Thermal Therapies. Trans. Medical Imaging, 31(4):984-994, 2012. Special Issue on Interventional Imaging, PMC3873725. [ bib | http ] |
| Y. Feng and D. Fuentes. Real-Time Predictive Surgical Control for Cancer Treatment Using Laser Ablation [Life Science]. Signal Processing Maga, IEEE, 28(3):134 -138, May 2011. [ bib ] |
| Y. Feng and D. Fuentes. Model-Based Planning and Real-Time Predictive Control for Laser-Induced Thermal Therapy. Inter. Journal Hyperthermia, 27(8):751-761, 2011. invited review. PMC3930104. [ bib ] |
| D. Fuentes, C. Walker, A. Elliott, A. Shetty, J. Hazle, and R. J. Stafford. MR Temperature Imaging Validation of a Bioheat Transfer Model for LITT. International Journal of Hyperthermia, 27(5):453-464, 2011. Cover Page, PMC3930085. [ bib | DOI ] |
| R. J. Stafford, D. Fuentes, A. Elliott, and K. Ahrar. Laser Induced Thermal Therapy for Ablation. Crit. Rev. Biomed. Eng., 38(1):79-100, 2010. [ bib ] |
| D. Fuentes, Y. Feng, A. Elliott, A. Shetty, R. J. McNichols, J. T. Oden, and R. J. Stafford. Adaptive Real-Time Bioheat Transfer Models for Computer Driven MR-guided Laser Induced Thermal Therapy. IEEE Trans. Biomed. Eng., 57(5), 2010. Cover Page, PMC3857613. [ bib |http ] |
| D. Fuentes, R. Cardan, R. J. Stafford, J. Yung, G. D. Dodd III, and Y. Feng. High Fidelity Computer Models for Prospective Treatment Planning of RF Ablation with in vitro Experimental Correlation. J. of Vascular and Interventional Radiology, 21(11):1725-1732, 2010. PMC2966506. [ bib | http ] |
| D. Fuentes, J. T. Oden, K. R. Diller, J. Hazle, A. Elliott, , A. Shetty, and R. J. Stafford. Computational Modeling and Real-Time Control of Patient-Specific Laser Treatment Cancer. Ann. BME., 37(4):763, 2009. PMC4064943. [ bib | http ] |
| Y. Feng, D. Fuentes, A. Hawkins, J. Bass, and M. N. Rylander. Model-Based Optimion and Real-Time Control for Laser Treatment of Heterogeneous Soft Tissues. CMAME, 198(21-26):1742-1750, 2009. Advances in Simulation-Based Engineering Sciences Special Issue Honoring Prof. J. Tinsley Oden, PMC2871336. [ bib | http ] |
| Y. Feng, D. Fuentes, A. Hawkins, J. Bass, M. N. Rylander, A. Elliott, A. Shetty, R. J. Stafford, and J. T. Oden. Nanoshell-Mediated Laser Surgery Simulation for Prostate Cancer Treatment. Engineering with Computers, 25(1):3-13, 2009. PMC2905827. [ bib | DOI ] |
| J. T. Oden, D. Fuentes, J. Bass, and Y. Feng. Dynamic-Data-Driven Systems Aid Patient-Specific Cancer Therapy. spie.org, 2008. [ bib | DOI ] |
| K. R. Diller, J. T. Oden, C. Bajaj, J. C. Browne, J. Hazle, I. Babuška, J. Bass, L. Bidaut, L. Demkowicz, A. Elliott, Y. Feng, D. Fuentes, S. Goswami, A. Hawkins, S. Khoshnevis, B. Kwon, S. Prudhomme, and R. J. Stafford. Advances in Numerical Heat Transfer, volume 3: Numerical Implementation of Bioheat Models and Equations, chapter 9: Computational Infrastructure for the Real-Time Patient-Specific Treatment of Cancer. Taylor & Francis Group, 2008. [ bib | http ] |
| J. T. Oden, K. R. Diller, C. Bajaj, J. C. Browne, J. Hazle, I. Babuška, J. Bass, L. Demkowicz, Y. Feng, D. Fuentes, S. Prudhomme, M. N. Rylander, R. J. Stafford, and Y. Zhang. Dynamic Data-Driven Finite Element Models for Laser Treatment of prostate cancer. Num. Meth. PDE, 23(4):904-922, 2007. PMC2850081. [ bib | http ] |
| D. Fuentes, D. Littlefield, J.T. Oden, and S. Prudhomme. Extensions of goal-oriented error estimation methods to simulations of highly-nonlinear response of shock-loaded elastomer-reinforced structures. Comput. Methods Appl. Mech. Engrg., 195:4659-4680, 2006. [ bib |http ] |