Publications
K. Ahmed, D. Fuentes, J.S. Lin, R. Ali, A. Kaseb, W. Wei, J.D. Hazle, A. Qayyum, and K. Elsayes. Volumetric RECIST Assessment of Hepatocellular Carcinoma Response to Sorafenib via Random Forest based Automated Segmentation. Radiology, 2015. Submitted. [ bib ] |
T. Figueira, D. Fuentes, M. Gagea, J. Ensor, K. Dixon, A. McWatters, S. Gupta, and A. Tam. Irreversible Electroporation (IRE) in the Epidural Space of the Porcine Spine: Effects on Dose Limiting Organs. Radiology, 2015. in review. [ bib ] |
J Tinsley Oden, Ernesto ABF Lima, Regina C Almeida, Yusheng Feng, Marissa Nichole Rylander, D. Fuentes, Danial Faghihi, Mohammad M Rahman, Matthew DeWitt, and Manasa Gadde. Toward predictive multiscale modeling of vascular tumor growth. Archives of Computational Methods in Engineering, pages 1-45, 2015. [ bib ] |
James A Bankson, Christopher M Walker, Marc S Ramirez, Wolfgang Stefan, D. Fuentes, Matthew E Merritt, Jaehyuk Lee, Vlad C Sandulache, Yunyun Chen, Liem Phan, et al. Kinetic modeling and constrained reconstruction of hyperpolarized 1-13c-pyruvate offers improved metabolic imaging of tumors. Cancer research, pages canres-0171, 2015. [ bib ] |
F. Maier, C. J. MacLellan, D. Fuentes, E.N.K Cressman, K. Hwang, J. D. Hazle, and R. J. Stafford. A Multi-Parametric Pulse Sequence for Characterion of Thermochemical Ablation Injections. International Journal of Hyperthermia, 2015. in review. [ bib ] |
R. Madankan, W. Stefan, J. D. Hazle, R. J. Stafford, and D. Fuentes. Accelerated Model-based Signal Reconstruction for Magnetic Resonance Imaging in Presence of Uncertainties. PMB, 2015. in review. [ bib ] |
S. Fahrenholtz, T. Moon, M. Franco, D. Medina, J. D. Hazle, R. J. Stafford, F. Maier, S. Danish, A. Gowda, A. Shetty, T. Warburton, andD. Fuentes. A Model Evaluation Study for Treatment Planning of Laser Induced Thermal Therapy. International Journal of Hyperthermia, 31(7):705-714, 2015. [ bib ] |
J. Yung, D. Fuentes, C. J. MacLellan, F. Maier, J. D. Hazle, and R. J. Stafford. Referenceless Magnetic Resonance Temperature Imaging using Gaussian Process Modeling. Medical Physics, 2015. in review. [ bib ] |
W. Stefan, D. Fuentes, E. Yeniaras, K. Hwang, J. D. Hazle, and R. J. Stafford. Novel Method for Background Phase Removal on MRI Proton Resonance Frequency Measurements. Trans. Medical Imaging, 2015. in review. [ bib ] |
F. Maier, D. Fuentes, J. S. Weinberg, J. Hazle, and R. J. Stafford. Robust Phase Unwrapping using a Sorted List, Multi-clustering Algorithm.Magnetic Resonance in Medicine, 73(4):1662-1668, 2015. [ bib | DOI | http ] |
D. Fuentes, J. Contreras, J. Yu, R. He, E. Castillo, R. Castillo, and T. Guerrero. Morphometry-based measurements of the structural response to whole-brain radiation. International Journal of Computer Assisted Radiology and Surgery, 10:393-401, 2014. [ bib | DOI | http ] |
Edward Castillo, Richard Castillo, D. Fuentes, and Thomas Guerrero. Computing global minimi to a constrained b-spline image registration problem from optimal l1 perturbations to block match data. Medical physics, 41(4):041904, 2014. [ bib ] |
Christopher J MacLellan, D. Fuentes, Andrew M Elliott, Jon Schwartz, John D Hazle, and R Jason Stafford. Estimating nanoparticle optical absorption with magnetic resonance temperature imaging and bioheat transfer simulation. International Journal of Hyperthermia, 30(1):47-55, 2013. [ bib ] |
D. Fuentes, JT Oden, KR Diller, J Yung, Y Feng, JD Hazle, A Shetty, and RJ Stafford. Dynamic Data Driven Application Systems, chapter Computational and MR-guided Patient-Specific Laser Induced Thermal Therapy of Cancer. Springer , 2013. accepted. [ bib ] |
E. Yeniaras, D. Fuentes, S.J. Fahrenholtz, J.S. Weinberg, F. Maier, J.D. Hazle, and R.J. Stafford. Design and initial evaluation of a treatment planning software system for MRI-guided laser ablation in the brain. International Journal of Computer Assisted Radiology and Surgery, pages 1-9, 2013. [ bib | DOI | http ] |
S. Fahrenholtz, R. J. Stafford, J. Hazle, and D. Fuentes. Generalised polynomial chaos-based uncertainty quantification for planning MRgLITT procedures. International Journal of Hyperthermia, 29(4):324-335, 2013. PMC3924420. [ bib | http ] |
R. Castillo, E. Castillo, D. Fuentes, M. Ahmad, A. M Wood, M. S. Ludwig, and T. Guerrero. A Reference Dataset for Deformable Image Registration Spatial Accuracy Evaluation using the COPDgene Study Archive. Physics in Medicine and Biology, 58(9):2861, 2013. PMC3677192. [ bib ] |
D. Fuentes, A. Elliott, J. S. Weinberg, A. Shetty, J. D. Hazle, and R. J. Stafford. An Inverse Problem Approach to Recovery of In-Vivo Nanoparticle Concentrations from Thermal Image Monitoring of MR-Guided Laser Induced Thermal Therapy. Ann. BME., 41(1):100-111, 2013. PMC3524364. [ bib | http ] |
D. Fuentes, J. Yung, J. D. Hazle, J. S. Weinberg, and R. J. Stafford. Kalman Filtered MR Temperature Imaging for Laser Induced Thermal Therapies. Trans. Medical Imaging, 31(4):984-994, 2012. Special Issue on Interventional Imaging, PMC3873725. [ bib | http ] |
Y. Feng and D. Fuentes. Real-Time Predictive Surgical Control for Cancer Treatment Using Laser Ablation [Life Science]. Signal Processing Maga, IEEE, 28(3):134 -138, May 2011. [ bib ] |
Y. Feng and D. Fuentes. Model-Based Planning and Real-Time Predictive Control for Laser-Induced Thermal Therapy. Inter. Journal Hyperthermia, 27(8):751-761, 2011. invited review. PMC3930104. [ bib ] |
D. Fuentes, C. Walker, A. Elliott, A. Shetty, J. Hazle, and R. J. Stafford. MR Temperature Imaging Validation of a Bioheat Transfer Model for LITT. International Journal of Hyperthermia, 27(5):453-464, 2011. Cover Page, PMC3930085. [ bib | DOI ] |
R. J. Stafford, D. Fuentes, A. Elliott, and K. Ahrar. Laser Induced Thermal Therapy for Ablation. Crit. Rev. Biomed. Eng., 38(1):79-100, 2010. [ bib ] |
D. Fuentes, Y. Feng, A. Elliott, A. Shetty, R. J. McNichols, J. T. Oden, and R. J. Stafford. Adaptive Real-Time Bioheat Transfer Models for Computer Driven MR-guided Laser Induced Thermal Therapy. IEEE Trans. Biomed. Eng., 57(5), 2010. Cover Page, PMC3857613. [ bib |http ] |
D. Fuentes, R. Cardan, R. J. Stafford, J. Yung, G. D. Dodd III, and Y. Feng. High Fidelity Computer Models for Prospective Treatment Planning of RF Ablation with in vitro Experimental Correlation. J. of Vascular and Interventional Radiology, 21(11):1725-1732, 2010. PMC2966506. [ bib | http ] |
D. Fuentes, J. T. Oden, K. R. Diller, J. Hazle, A. Elliott, , A. Shetty, and R. J. Stafford. Computational Modeling and Real-Time Control of Patient-Specific Laser Treatment Cancer. Ann. BME., 37(4):763, 2009. PMC4064943. [ bib | http ] |
Y. Feng, D. Fuentes, A. Hawkins, J. Bass, and M. N. Rylander. Model-Based Optimion and Real-Time Control for Laser Treatment of Heterogeneous Soft Tissues. CMAME, 198(21-26):1742-1750, 2009. Advances in Simulation-Based Engineering Sciences Special Issue Honoring Prof. J. Tinsley Oden, PMC2871336. [ bib | http ] |
Y. Feng, D. Fuentes, A. Hawkins, J. Bass, M. N. Rylander, A. Elliott, A. Shetty, R. J. Stafford, and J. T. Oden. Nanoshell-Mediated Laser Surgery Simulation for Prostate Cancer Treatment. Engineering with Computers, 25(1):3-13, 2009. PMC2905827. [ bib | DOI ] |
J. T. Oden, D. Fuentes, J. Bass, and Y. Feng. Dynamic-Data-Driven Systems Aid Patient-Specific Cancer Therapy. spie.org, 2008. [ bib | DOI ] |
K. R. Diller, J. T. Oden, C. Bajaj, J. C. Browne, J. Hazle, I. Babuška, J. Bass, L. Bidaut, L. Demkowicz, A. Elliott, Y. Feng, D. Fuentes, S. Goswami, A. Hawkins, S. Khoshnevis, B. Kwon, S. Prudhomme, and R. J. Stafford. Advances in Numerical Heat Transfer, volume 3: Numerical Implementation of Bioheat Models and Equations, chapter 9: Computational Infrastructure for the Real-Time Patient-Specific Treatment of Cancer. Taylor & Francis Group, 2008. [ bib | http ] |
J. T. Oden, K. R. Diller, C. Bajaj, J. C. Browne, J. Hazle, I. Babuška, J. Bass, L. Demkowicz, Y. Feng, D. Fuentes, S. Prudhomme, M. N. Rylander, R. J. Stafford, and Y. Zhang. Dynamic Data-Driven Finite Element Models for Laser Treatment of prostate cancer. Num. Meth. PDE, 23(4):904-922, 2007. PMC2850081. [ bib | http ] |
D. Fuentes, D. Littlefield, J.T. Oden, and S. Prudhomme. Extensions of goal-oriented error estimation methods to simulations of highly-nonlinear response of shock-loaded elastomer-reinforced structures. Comput. Methods Appl. Mech. Engrg., 195:4659-4680, 2006. [ bib |http ] |
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