Services
The Advanced Technology Genomics Core (ATGC) offers a variety of services
Select a service category below to learn more:
-
Illumina Next Generation Sequencing
Complete next generation sequencing service for gDNA, total RNA or ChIP DNA, including sample processing, if required.
-
Sanger Sequencing
The ATGC provides DNA Sequencing from single or double stranded DNA, purified plasmids, PCR products, and BACs
-
Nanopore Long Read Sequencing
Enables the direct (amplification-free) sequencing of DNA and RNA and can directly read base modifications
-
Single Cell Analysis
The ATGC offers single cell analysis using 10X Genomics Chromium and Mission Bio Tapestri platforms
-
Microarray Services
Includes gene expression, SNP profiling and methylation analysis
-
Fluorescent Fragment Length Analysis
Used to determine genotypes and assess loss of heterozygosity and microsatellite instability
-
nanoString nCounter Analysis
Used to perform digital nucleic acid (RNA and DNA) counting
-
Bionano Optical Genome Mapping
Visually assess the whole genome by arraying large DNA fragments, allowing a high resolution SV profiling
-
Visium CytAssist Spatial Transcriptomics
Probe-based assay for tissue mRNA profiling for human or mouse samples. Capable of running FFPE, fresh frozen, or fixed
Service Request Forms
-
ILLUMINA NEXT GENERATION SEQUENCING SERVICE REQUEST FORM
-
Illumina Next Generation Sequencing - Sample Submission
-
Illumina Next Generation Sequencing - Library Submission
-
Sanger Based DNA Sequencing
-
Nanopore Long Read Sequencing Request Form
-
10X Genomics Chromium Single Cell Seq Service
-
Mission Bio Service Request
-
NGS Data Analysis Request
-
Microarray Services
-
Fluorescent Fragment Length Analysis
-
Nanostring nCounter Analysis Service
-
Visium CytAssist Spatial Transcriptomics Request Form
Service Pricing
Service pricing varies based on the service needed, number of samples and the requestor's affiliation to MD Anderson. Note that prices are subject to change.
Illumina Next Generation Sequencing
| Sample preparation services (per sample) | MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
ChIP-Seq (low input) Library Preparation |
$106 |
$112 |
$181 |
microRNA-Seq* (library preparation included) |
$228 |
$240 |
$389 |
Low input mRNA-Seq |
$262 |
$276 |
$446 |
Twist RNA Exome |
$2,529 |
$2,661 |
$4,309 |
Twist T200.1 |
$1,780 |
$1,873 |
$3,033 |
Stranded mRNA-Seq* (library preparation included) |
$191 |
$201 |
$325 |
Low input Total RNA-Seq |
$182 |
$191 |
$310 |
Strand Specific Total RNA-Seq-Illumina |
$210 |
$221 |
$358 |
Agilent library and capture (Post Capture Pooling) |
$632 |
$665 |
$1,077 |
Indexed Library Preparation |
$106 |
$112 |
$181 |
TwinStrand AML Panel (48 sample submission, price per sample) |
$724 |
$762 |
$1,234 |
Twist Exome (per 8 sample capture) |
$1,830 |
$1,925 |
$3,118 |
Illumina Next Generation Sequencing: NovaSeq6000
Illumina Next Generation Sequencing: NovaSeq6000 |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
SP-500 |
$6,606 |
$6,950 |
$11,257 |
SP-500 Xp (lane splitting-per lane) |
$3,505 |
$3,687 |
$5,973 |
SP-300 |
$5,178 |
$5,447 |
$8,823 |
SP-300 Xp (lane splitting-per lane) |
$2,800 |
$2,946 |
$4,771 |
SP-200 |
$4,634 |
$4,875 |
$7,896 |
SP-200 Xp (lane splitting-per lane) |
$2,517 |
$2,648 |
$4,289 |
SP-100 |
$3,355 |
$3,529 |
$5,717 |
SP-100 Xp (lane splitting-per lane) |
$1,888 |
$1,986 |
$3,217 |
S1-300 |
$8,208 |
$8,635 |
$13,986 |
S1-300 Xp (lane splitting-per lane) |
$4,314 |
$4,538 |
$7,351 |
S1-200 |
$7,566 |
$7,959 |
$12,892 |
S1-200 Xp (lane splitting-per lane) |
$3,993 |
$4,201 |
$6,804 |
S1-100 |
$5,965 |
$6,275 |
$10,164 |
S1-100 Xp (lane splitting-per lane) |
$3,193 |
$3,359 |
$5,441 |
S2-300 |
$14,038 |
$14,768 |
$23,921 |
S2-300 Xp (lane splitting-per lane) |
$7,227 |
$7,603 |
$12,315 |
S2-200 |
$12,850 |
$13,518 |
$21,896 |
S2-200 Xp (lane splitting-per lane) |
$6,698 |
$7,046 |
$11,413 |
S2-100 |
$10,422 |
$10,964 |
$17,759 |
S2-100 Xp (lane splitting-per lane) |
$5,421 |
$5,703 |
$9,237 |
S4-300 |
$20,360 |
$21,419 |
$34,693 |
S4-300 Xp (lane splitting-per lane) |
$5,167 |
$5,436 |
$8,805 |
S4-200 |
$17,554 |
$18,467 |
$29,912 |
S4-200 Xp (lane splitting-per lane) |
$4,465 |
$4,697 |
$7,608 |
NextSeq500 Sequencing
Price per run |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
| High Output | |||
75SR |
$2,025 |
$2,130 |
$3,451 |
75PE |
$3,647 |
$3,837 |
$6,214 |
150PE |
$5,655 |
$5,949 |
$9,636 |
| Mid-Output | |||
75PE |
$1,587 |
$1,670 |
$2,704 |
150PE |
$2,325 |
$2,446 |
$3,962 |
Illumina Next Generation Sequencing
MiSeq |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
MiSeq600 V3 |
$2,025 |
$2,130 |
$3,451 |
MiSeq300 V2 |
$1,455 |
$1,531 |
$2,479 |
MiSeq150Nano |
$574 |
$604 |
$978 |
MiSeqv3-150 |
$1,293 |
$1,360 |
$2,203 |
MiSeqv2-50 |
$1,187 |
$1,249 |
$2,023 |
MiSeq500 V2 |
$1,609 |
$1,693 |
$2,742 |
iSeq |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
iSeq300 |
$812 |
$854 |
$1,384 |
Sample Quality Assurance (QA) Quality Control (QC) Services
Sample QA/QC Services |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
RNA Sample QA/QC- RNA 6000 Nano kit (1–11 samples) |
$90 |
$95 |
$153 |
RNA Sample QA/QC- RNA 6000 Pico kit (1–10 samples) |
$93 |
$98 |
$158 |
DNA Sample QA/QC- HS DNA chip (1–10 samples) |
$121 |
$127 |
$206 |
Fragment Analyzer (1–10 samples) |
$68 |
$72 |
$116 |
Qubit (1–10 samples) |
$55 |
$58 |
$94 |
TapeStation QC-RNA |
$8 |
$8 |
$14 |
TapeStation QC-DNA |
$9 |
$9 |
$15 |
Sanger Sequencing
Price per reaction |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
Sanger sequencing (single reaction) |
$5 |
$5 |
$9 |
Sanger sequencing (96 well plate) |
$4 |
$4 |
$7 |
Sanger Based Gene Resequencing
Sanger Based Gene Resequencing |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
Mutation Detection (per amplicon, 2 sequences) |
$25 |
$26 |
$43 |
NGS Amplicon |
$32 |
$34 |
$55 |
Fluorescent Fragment Analysis
Fluorescent Fragment Analysis |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
Sample Injection (1–48 samples) |
$115 |
$121 |
$196 |
Sample Injection (49–96 samples) |
$230 |
$242 |
$392 |
Description ddPCR
Description ddPCR |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
First 8 samples on a 96 well Plate |
$99 |
$104 |
$169 |
Each additional 8 samples on the plate |
$57 |
$60 |
$97 |
10X Genomics
10X Genomics 3'mRNA Capture and Library V3 |
MD Anderson Member |
GCC Member |
External |
1st sample |
$2,712 |
$2,853 |
$4,621 |
Samples 2–8 (per sample) |
$1,662 |
$1,748 |
$2,832 |
10X Genomics 5' Gene expression Capture cell |
MD Anderson Member |
GCC Member |
External |
1st sample |
$2,969 |
$3,123 |
$5,059 |
Samples 2–8 (per sample) |
$1,664 |
$1,751 |
$2,835 |
10X Genomics 5' Gene expression Capture plus T or B cell |
MD Anderson Member |
GCC Member |
External |
1st sample |
$3,927 |
$4,131 |
$6,692 |
Samples 2–8 (per sample) |
$1,921 |
$2,021 |
$3,273 |
10X Genomics 5' Gene expression Capture plus T and B cell |
MD Anderson Member |
GCC Member |
External |
1st sample |
$4,885 |
$5,139 |
$8,324 |
Samples 2–8 (per sample) |
$2,178 |
$2,291 |
$3,711 |
10X Genomics ATAC-Seq |
MD Anderson Member |
GCC Member |
External |
1st sample |
$2,867 |
$3,016 |
$4,885 |
Samples 2–4 (per sample) |
$1,827 |
$1,922 |
$3,113 |
10X Genomics Multi-ome |
MD Anderson Member |
GCC Member |
External |
1st sample |
$5,132 |
$5,399 |
$8,745 |
Samples 2–4 (per sample) |
$3,486 |
$3,667 |
$5,940 |
Mission Bio
Mission Bio |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
Targeted DNA V2 (legacy projects only) |
$2,647 |
$2,785 |
$4,510 |
Targeted DNA and Protein V2 (legacy projects only) |
$2,812 |
$2,958 |
$4,792 |
Targeted DNA V3 |
$3,334 |
$3,507 |
$5,681 |
Targeted DNA and Protein V3 |
$3,500 |
$3,682 |
$5,964 |
Nanostring Expression Assay Processing
Nanostring Expression Assay Processing |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
Per sample submitted in batches of 12 |
$55 |
$58 |
$94 |
Illumina Microarray
Illumina Microarray Service* per sample (includes array) |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
| Illumina Infinium Genotyping *(CytoSNP and Omni arrays) | |||
HumanCytoSNP-850K |
$483 |
$508 |
$823 |
HumanOmni2.5-8 |
$375 |
$395 |
$639 |
HumanOmniExpress-Exome |
$296 |
$311 |
$504 |
| Illumina Infinium Genotyping-FFPE (OmniExpress and CytoSNP)-per sample | |||
HumanCytoSNP 850K-ffpe |
$586 |
$616 |
$999 |
HumanOmniExpress-24_FFPE |
$399 |
$420 |
$680 |
Infinium MethylationEPIC |
$486 |
$511 |
$828 |
Infinium MethylationEPIC-FFPE |
$589 |
$620 |
$1,004 |
Bionano
MD Anderson Member |
GCC Member |
External |
|---|---|---|
$1,957 |
$2,059 |
$3,335 |
Nanopore
MD Anderson Member |
GCC Member |
External |
|---|---|---|
$1,930 |
$2,030 |
$3,289 |
NGS Data Analysis (Full Service Only)
Price per sample |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
Bulk mRNA and TOTAL RNA-Seq |
$90 |
$95 |
$153 |
Whole Exome (Tumor/Normal pair) |
$120 |
$126 |
$204 |
Bulk ChIP-Seq |
$90 |
$95 |
$153 |
scRNA-Seq |
$400 |
$421 |
$682 |
WGS (per T/N pair) |
$180 |
$189 |
$307 |
Visium Spatial Transcriptomics
Visium Spatial Transcriptomics |
MD Anderson Member |
GCC Member |
External |
|---|---|---|---|
Visium CytAssist Spatial GE FFPE (2 sample 6.5mm slide) |
$5,613 |
$5,905 |
$9,565 |
Visium CytAssist Spatial GE FFPE (2 sample 11mm slide) |
$8,982 |
$9,449 |
$15,305 |