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Suk-Young Yoo, Ph.D.

Senior Statistical Analyst

Degrees

  • Ph.D. in Statistics, Purdue University, West Lafayette, IN
  • M.S. in Applied Statistics, Purdue University, West Lafayette, IN
  • B.S. in Mathematics, Yonsei University, Seoul, Korea

Areas of Interest

  • Statistical analysis
  • Bioinformatics
  • Statistical Genetics/Genomics
  • Epigenetics/Epigenomics

Publications

Murray JL, Thompson P, Yoo S-Y, Do K-A, Zhou R, Lui Y, Sahin A, Bondy ML, Brewster AM (2012) Prognostic value of single nucleotide polymorphisms  of candidate genes associated with inflammation in early stage breast cancer. Clinical Cancer Research (in press)

Bayraktar S, Thompson PA, Yoo S-Y, Do K, Sahin AA, Arun BK, Bondy, ML, Brewster, AM (2012) The relationship between eight GWAS-identified single nucleotide polymorphisms and primary breast cancer outcomes. Oncologist (in press)

Heymach JV, Shackleford TJ, Tran HT, Yoo S-Y, Do KA, Wergin M, Saintigny P, Vollmer RT, Polascik TJ, Snyder DC, Ruffin MT 4th, Yan S, Dewhirst M, Kunnumakkara AB, Aggarwal BB, Demark-Wahnefried W (2011) Effect of low-fat diets on plasma levels of NF-κB-regulated inflammatory cytokines and angiogenic factors in men with prostate cancer. Cancer Prevention Research (Philadelphia) 4(10): 1590-8.

Yang L, Wang H, Kornblau SM, Graber DA, Zhang N, Matthews JA, Wang M, Weber DM, Thomas SK, Shah JJ, Zhang L, Lu G, Zhao M, Muddasani R, Yoo S-Y, Baggerly KA, Orlowski RZ (2011) Evidence of a role for the novel zinc-finger transcription factor ZKSCAN3 in modulating cyclin D2 expression in multiple myeloma. Oncogene 30: 1329-40.

Pignatta D, Yoo S-Y, Henry I, Madlung A, Doerge RW, Chen JZ, Comai L (2010) Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling. New Phytologist 186: 194-206

Gaeta RT, Yoo SY, Pires JC, Doerge RW, Chen ZJ, Osborn TC (2009) Analysis of gene expression in resynthesized Brassica napus allopolyploids using Arabidopsis 70mer olico microarrays. PLoS One 4: e4760.

Yoo SY, Doerge RW (2008) A two-stage statistical approach for estimating effect of DNA methylation on differential expression using tiling array technology. The proceedings of the Kansas State University Conference on Applied Statistics in Agriculture. Manhattan, KS.

Yoo S-Y, Doerge RW (2008) Integrating epigenomic results. In: Feguson-Smith A, Greally JM, Martienssen RA, eds. Epigenomics. New York. Springer.

Abstracts

Maki Y, Fujimoto J, Yoo S-Y, Gower A, Kabbout M, Shen L, Garcia MM, Chow C-W, Hong WK, Kalhor N, Wang J, Moran C, Spira A, Coombes KR, Wistuba I, Kadara H (2013) Transcriptomic architecture of the airway field cancerization in early-stage non-small cell lung cancer. AACR

Aparicio A, Gallichotte E, Cheng H, Maity S, Logothetis C, Yoo S-Y, Baggerly B, Tewari M (2013) Circulating miR as clinically meaningful classifiers of castration-resistant prostate cancers. AACR

Sircar K, Majewski T, Yoo S-Y, Patel L, Wani, K, Tamboli P, Czerniak , Baggerly K, Aldape K (2012) Sarcomatoid and rhabdoid RCC show a similar, poor prognosis molecular signature that is separable from non-sarcomatoid RCC. USCAP

Pande M, Thompson PA, Yoo S-Y, Do KA, Sahin AA, Amos CI, Bondy, ML Brewster AM (2012) Genetic variants in the vitamin D pathway and breast cancer disease free survival. AACR

Wang R-Y, Qui YH, Yoo S-Y, McQueen T, Chen Y, Zhen Z, Coombes, KR, Shcober W, Konopleva M, Kornblau S, Andreeff M (2012)  Proteomic profiling of AML bone marrow-derived mesenchymal stem cells (MSC) reveals marked differences from normal MSC. American Society of Hematology

Le X-F, Wu Y, Spizzo R, Yoo S-Y, Mao M, Wang J, Calin GA, Bast RC Jr (2011) HER2-targeted antibody upregulates miRNA-194 and downregulates profilin 2 and DNMT3A in HER2-positive breast cancer. AACR

Murray J, Thompson P, Zhou R, Yoo S-Y, Liu Y, Sahin A, Bondy M, Brewster A (2011) Protective effect of single nucleotide polymorphisms (SNPs) of candidate genes associated with inflammation in early stage breast cancer. ASCO

Brewster AM, Thompson P, Yoo S-Y, Sahin A,  Do K, Li Y, Zhou R, Murray JL, Meric-Bernstam F, Mills G, Bondy M (2011) Association between single nucleotide polymorphisms of the PI3-AKT-mTOR signaling pathway and breast cancer recurrence. ASCO

Conley AP, Reynoso D, Yoo S-Y, Bloom G, Wang WL, Cogdell D, Hu L, Dumont A, Dumont S, Gonzalez R, Reed D, Ravi V, Wang J, Haura E, Pledger WJ, Zhang W, Trent JC (2011) MicroRNA expression characteristics in imatinib-treated, paried human GIST samples. Connective Tissue Oncology Society

Kadara H, Fujimoto J, Yoo S-Y, Garcia M, Kabbout M, Basey A, Wang J, Coombes KR, Kim ES, Hong WK, Kalhor N, Moran C, Wistuba I (2011) Gene expression profiling of lung tumors and matched normal airways reveals common and disparate aberrant pathways in squamous cell carcinoma and adenocarcinoma development and potential markers for chemoprevention in early stage lung cancer patients. AACR

Sharma P, Tsavachidou D, Kamat A, Zhang L, Tang DN, Chen H, Fu T, Sun J, Yoo S-Y, Troncoso P, Yuan J, Wolchok J, Quezada S, Logothetis C, Allison J (2009) Immunolgic impact of anti-CTLA-4 therapy.  ASCO

Posters

Pande M, Thompson PA, Lui Y, Yoo S-Y, Do KA, Sahin AA, Amos CI, Frazier ML, Bondy, ML Brewster (2012) Genetic variants in the vitamin D pathway and breast cancer disease free survival. AACA

Kadara H, Fujimoto J, Yoo,S-Y, Garcia M, Kabbout M, Basey A, Wang J, Coombes KR, Kim ES, Hong WK, Kalhor N, Moran C, Wistuba I (2012) Gene expression profiling of lung tumors and matched normal airways reveals common and disparate aberrant pathways in squamous cell carcinoma and adenocarcinoma development and potential markers for chemoprevention in early stage lung cancer patients. AACR

Murray JL, Thompson P, Zhou R, Yoo S-Y, Liu Y, Do KA, Sahin A, Bondy M, Brewster A (2011) Prognostic value of single nucleotide polymorphisms (SNPs) of candidate genes associated with inflammation in early stage breast cancer. ASCO

Updated January 15, 2013.


© 2014 The University of Texas MD Anderson Cancer Center